Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VNPAYFVLLVEELKTKYLVKDICQILQVPLSTYYRWKKKDFSQSSLEKKIGQLCKAYQFTYGYRKIAALMKQEEQVGINKVQRIMQKYQWQCQVKVKKKNRPGSAYYQTENHLNRNFQASQPLEKLTTDITYLYFGDCRLYLSSIMDLYNGEIVAYSIGEKQDTELVLDTLNQLSLPEG--SLLHSDQGSVYTSYEYYQCCKKKNVIRSMSRKGTPADNAPIECFHSSLKCETFYHKTAYKYAKSI-VIQIVKDYIKYYNEKRIQQKLGYQSPINFRKQAA--- |
1BIZ Chain:A ((8-162)) | ----------------------------------------------------------------------------------------------------------------------VDSSPGIWQLDCTHLEG----KVILVAVHVASGYIEAEVIP-AETGQETAYFLLKLAGRW-PVKTVHTDNGSNFTSTTVKAACWWAGIKQEFG--------GVIESMNKELKKIIGQVRDQAE-----HLKTAVQMAVFIHNKKRKGGIGGYSAGERIVDIIATDI |
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General information:
TITO was launched using:
| RESULT:
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Template: 1BIZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49342 for 1037 contacts (-47.6/contact) +
2D Compatibility (PS) -14909 + (NN) -3805 + (LL) 10248
1D Compatibility (HY) 2000 + (ID) 1350
Total energy: -57158.0 ( -55.12 by residue)
QMean score : 0.322
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