Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGIDGIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHSSTEHTWFKESRSSKTNPKRDYYIWRE-----KPNNWESFFGGSAWEKDELTGEYYYHSFAKEQADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFPDNPVASGEMEHVYDRNQSG--LEQALEDIASFCRKERDVFLVGEISSDKLPEIARYSSKKM--LDVTFNFNFGSVDQLDAKSVF-----------TTLNEMETALNEGQWPTLFFGSHDMSRFRSRLASGDIV----KTQLLAFLMLTAKGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQALQTG-TDEKQALEIAIEKTRDKARGPMIFPDGKP--FTLGEPWIKMATLPEE--------EARMMWDFYQALLAFRKENDFKEMEY-TFLKLD---GEVLSYQRG----EFIFLLHFGEEEITYPLQGNYQLVFGEAMMVENGIRMGAHTGIALRVEE |
| 4HOW Chain:A ((47-589)) | --WWKQAVFYQVYPRSFKDTNGDGIGDLNGIIENLDYLKKLGIDAIWINPHYDSPNTDNGYDIRDYRKIMKEYGTMEDFDRLISEMKKRNMRLMIDIVINHTSDQHAWFVQSKSGKNNPYRDYYFWRDGKDGHAPNNYPSFFGGSAWEKDDKSGQYYLHYFAKQQPDLNWDNPKVRQDLYDMLRFWLDKGVSGLRFDTVATYSKIPNFPD--LSQQQLKNFAEEYTKGPKIHDYVNEMNREVLSHYDIATAGEIFGVPLDKSIKFFDRRRNELNIAFTFDLIRLDR-DADERWRRKDWTLSQFRKIVDKVDQTAGEYGWNAFFLDNHDNPRAVSHFGDDRPQWREHAAKALATLTLTQRATPFIYQGSELGMTNYPFKKIDDFDDVEVKGFWQDYVETGKVKAEEFLQNVRQTSRDNSRTPFQWDASKNAGFTSGTPWLKINPNYKEINSADQINNPNSVFNYYRKLINIR--HDIPALTYGSYIDLDPDNNSVYAYTRTLGAEKYLVVINFKEEVMHYTLPGD--LSINKVITENNSHTIVNKNDRQLRLE- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4HOW.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -174518 for 4203 contacts (-41.5/contact) +
2D Compatibility (PS) -53886 + (NN) -28561 + (LL) 720
1D Compatibility (HY) -42000 + (ID) 8700
Total energy: -306945.0 ( -73.03 by residue)
QMean score : 0.427
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