Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKHYQIAIDQSTSGTKVLLF-KEGKLVDRLDKKHRQLYPKKGWVEHNPIEICQNVRTLIADILTKHDLITADIERLALTNQRETIVAWDKQTGKPLYNAIVWQCNRTKEICETLKEAGYEKRIKQLTGLKIDSYFSASKMMWLLENISAVRDAASRNQLAFGTMDAWLLFSLTDDSNYFTDRTNASRTLLYDIEKNDWSDELLELFGVKRAYLPEVKQSAGSFG---SYQ----EIPIHSVMADSEAALYGQGCDTFGAVKATLGTGCSVMMQIGEN-RLPENDAILTTLAWDVAGVNQFALEGIIRSCGDTLVFLSEQLELFNDYDTACKRAFQLPCNEGVVLIPGQLGLGAPYWNTDIRAEILGLTREHTKWHIIRAGFTSIAFQIKAVIDQMELMIGQNIKRLQVDGGLTKQHELMQYLADVLKAEVAVSPAEELSAIGAIEIADNNLQNKRTIAKLYQPSITHTHALEDFQEWEKQVKSSILKIQKVRNFK |
| 3H3N Chain:O ((3-448)) | -EKNYVMAIDQGTTSSRAIIFDRNGKKIGSSQKEFPQYFPKSGWVEHNANEIWNSVQSVIAGAFIESGIRPEAIAGIGITNQRETTVVWDKTTGQPIANAIVWQSRQSSPIADQLKVDGHTEMIHEKTGLVIDAYFSATKVRWLLDNIEGAQEKADNGELLFGTIDSWLVWKLTDGQVHVTDYSNASRTMLYNIHKLEWDQEILDLLNIPSSMLPEVKSNSEVYGHTRSYRFYGSEVPIAGMAGDQQAALFGQMAFEKGMIKNTYGTGAFIVMNTGEEPQLSDND-LLTTIGYGINGKVYYALEGSIFVAGSAIQWLRDGLRMIETSPQSEELAAKAKGDNEVYVVPAFTGLGAPYWDSEARGAVFGLTRGTTKEDFVRATLQAVAYQSKDVIDTMKKDSGIDIPLLKVDGGAAKNDLLMQFQADILDIDVQRAANLETTALGAAYLA------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3H3N.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -257374 for 4035 contacts (-63.8/contact) +
2D Compatibility (PS) -46761 + (NN) -16108 + (LL) 4164
1D Compatibility (HY) -30400 + (ID) 8900
Total energy: -355379.0 ( -88.07 by residue)
QMean score : 0.506
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