Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKLVKYFAIFGVVFSMFFSLLLFVTIVFAEEDDTRSSREEMIQQGGLNVSAEVLAHRPMVEKYCKEFGIEEYVNYILAIMQVESGGTAEDVMQSSESLGLPPNSLSTEESIKQGCKYFSELLASAESNGCDINTVIQSYNYGGGFINYVASNGKKYSYEL-----AESFSKDKAGGVKVDYPNPIAIPVNGGWRYNYGNQFYVLLVSQYLTPVQFDDETVQAIMNEALK-YEGYPYVFGGSSPSTSFDCSGL-TQWSYAVAGIQLPRVAQAQYDATQHIPLSEAKAGDLVFFHSTYDAGSYVTHVGIYVGNNQMYHAGDP------IGYTNLTD------SYWQAHLIGAGRIIK------- |
2EVR Chain:A ((25-246)) | --------------------------------------------------------------------------------------------------------------------------------------KLGEYQCLADLNLFDSPECTRLATQSASGRHLWVTSNHQNLAVEVYLCEDDYPGWLSLSDFDSLQPATVPYQAATFSESEIKKLLAEVIAFTQKAMQQSNYYLWGGTVGP-NYDCSGLMQ-AAFASVGIWLPRDAYQQEGFTQPITIAELVAGDLVFFGT----SQKATHVGLYLADGYYIHSSGKDQGRDGIGIDILSEQGDAVSLSYYQQLRGAGRVFKSYEPQRR |
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General information:
TITO was launched using:
| RESULT:
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Template: 2EVR.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -56506 for 1485 contacts (-38.1/contact) +
2D Compatibility (PS) -21086 + (NN) -9485 + (LL) 10616
1D Compatibility (HY) -6000 + (ID) 2400
Total energy: -84861.0 ( -57.15 by residue)
QMean score : 0.213
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