Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MELTKENFQKLDLIHLSLENRHSMSEIIDILSESYIEITQSGVVKDYAYYKSLTTLGDSNLAIMEYDVKILDETKVLSYYKLKNLSENNYTMRSNIWIFENGSWKLTFHQGTRII
2KAU Chain:A ((1-100))
MELTPREKDKLLLFTAALVAERRLARGLKLNYPESVALISAFIMEGARD-------GKSVASLMEEGRHVLTREQVM-----EGVPEMIPDIQVEA-TFPDGSKLVTVHNPII--
General information:
TITO was launched using:
RESULT:
Template:
2KAU.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -9479 for 682 contacts (-13.9/contact) +
2D Compatibility (PS) -10398 + (NN) -1945 + (LL) 1544
1D Compatibility (HY) -4000 + (ID) 1000
Total energy: -25278.0 ( -37.06 by residue)
QMean score : 0.157
(partial model without unconserved sides chains):
PDB file :
Tito_2KAU.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2KAU-query.scw
PDB file :
Tito_Scwrl_2KAU.pdb
: