Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDILQTANERMEQLAALMNKDIEQKIPAGEKVKVGVDLGTSSIVFVVLDENNVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKNRAEKCLGISLTHASGAIPPGTVGNNKKVVANVIESA--------------GMEALYTIDEPTAAAAVLDL--------QNGAVVDVGGGTTGISVFEN--GEV--IYTADEPTGGTHMTLVLAGYYGVPV------EEAEQNKRA--------QKDSSEHFSVMRPVVEKMAEITRVHLEKS--PSEPLYIVGGASAYSQFKDTFESYLKM-PVFQ-PNYPQYVTPLGIAMSSGSENL |
| 2FSJ Chain:A ((122-344)) | -----------------------------------------------------------------------------------------------LVIGSGTPLGTFDLEVKAAKEALENKVLTVTGPEGEVRQFNITRLIMRPQGVGAALYLLNQGIIEQQPGYGVVIDVGSRTTDVLTINLMDMEPVVELSFSLQIGVGDAISALSRKIAKETGFVVPFDLAQEALSHPVMFRQKQVGGPEVSGPILEDLANRIIENIRLNLRGEVDRVTSLIPVGGGSNL--IGDRFEEIAPGTLVKIKPEDLQFANALGYRDAAER--- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2FSJ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -49712 for 1395 contacts (-35.6/contact) +
2D Compatibility (PS) -18995 + (NN) -9026 + (LL) 7996
1D Compatibility (HY) -2800 + (ID) 1800
Total energy: -74337.0 ( -53.29 by residue)
QMean score : 0.266
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