Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ------------------MSKVLEQ--VEAIVAPIT----------------DELQLEL---VDIAFEKEGPNWFLRIFIDKDGGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERP-----LKKEQDFENAVSK----YVHVTSYEPIDGRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKA--RLAIQF------------------- |
2A35 Chain:A ((4-215)) | TPKRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAEHPRLDNPVGPLAELLPQLDGSIDTAFCCLGTTIKEAGSEEAFRAVDFDLPLAVGKRALE-------MGARHYLVVSALGADAKSSIFYNRVKGELEQALQEQGWPQLTIARPSLLFGPR---------EEFRLAEILAAPIAGKYHGIEACDLARALWRLALEEGKGVRFVESDELRKLGKGS |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2A35.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) 8459 for 936 contacts (9.0/contact) +
2D Compatibility (PS) -14836 + (NN) -4185 + (LL) 784
1D Compatibility (HY) -4000 + (ID) 1550
Total energy: -15328.0 ( -16.38 by residue)
QMean score : 0.316
|
|
|