Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MEKNIDVLQNWLKDQGAEVGFLTDPENIAYFSGYHSEPHERVLGLAVFSDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKFAIEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQVGVDEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTP---GETKIKKGDLVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKV-KAGVKASEIDLTARNIIREAGFGDYFPHRLGHGLGA--SVHEFP---SITETNSMELQENMVFTIEPGIYVPGVAGVRIEDDLVVTKDGVQVLTEFPKTLQVIE |
| 3CTZ Chain:A ((368-542)) | ----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------EFRRQQADFVDLSFPTISSTGPTGAIIHYAPVPETNRTLSLDEVYLIDSGAQYKDGTTDVTRTMHFETPTAYEKECFTYVLKGHIAVSAAVFPTGTKGHLLDSFARSALWDSGL-DYL-HGTGHGVGSFLNVHEGPCGISYKTFSDEPLEAGMIVTDEPGYYEDGAFGIRIENVVLV------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CTZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -57228 for 1206 contacts (-47.5/contact) +
2D Compatibility (PS) -17784 + (NN) -1781 + (LL) 13844
1D Compatibility (HY) -8000 + (ID) 2800
Total energy: -73749.0 ( -61.15 by residue)
QMean score : 0.434
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