Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | --LHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNRANVHYIEW--LNEDKLPNLEDLPVDVCINLAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKMKSKPKLWINASAIGAYTSSKSTIYLDTEENTYADNFLGKTVYEWEKTASAASDLGIRVVYARFGLVLGTNGGSFPVFEKLFQTYTGGRFGNGRQWYSWIHVDDVVAAILFIFDHE---QINGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILGERAMTILDSQRAYPEKLMSNHFEFRFETLQEALDDLLD---- |
| 3GPI Chain:A ((2-279)) | SLSKILIAGC-GDLGLELARRLTAQGHEVTGLRRSAQPMPAGVQTLIADVTRPDTLASIVHLRPEILVYCVAASEYSLSY------------VEGLRNTLSALEG--APLQHVFFVSSTGVYGQEVEE-WLDEDTPPIAKDFSGKRMLEAEALLAA-----YSSTILRFSGIYGPGRLRMIRQAQ-----TPEQWPARNAWTNRIHRDDGAAFIAYLIQQRSHAVPERLYIVTDNQPLPVHDLLRWLADRQGIAYPAGATPPV------------QGNKKLSNARLLASGYQLIYPDYVSGYGALLAAMRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 3GPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -156139 for 2171 contacts (-71.9/contact) +
2D Compatibility (PS) -28517 + (NN) -12972 + (LL) 3440
1D Compatibility (HY) -11200 + (ID) 2500
Total energy: -207888.0 ( -95.76 by residue)
QMean score : 0.405
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