Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNNIMLVCSAGMS-----TSLLVKKMTEAIEKQQVDATVIAVAEADFDKYKG-NVDVVLLAPQVRFLEK-NLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK
1IOW Chain:? ((1-96))
MTDKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVDPKEVDVTQLKSMGFQKVFIALHGRGGEDGTLQGMLELMGLP-----------YTGSGVMASALSMD--
General information:
TITO was launched using:
RESULT:
Template:
1IOW.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -61466 for 650 contacts (-94.6/contact) +
2D Compatibility (PS) -9373 + (NN) -3508 + (LL) 760
1D Compatibility (HY) -4400 + (ID) 1100
Total energy: -79087.0 ( -121.67 by residue)
QMean score : 0.597
(partial model without unconserved sides chains):
PDB file :
Tito_1IOW.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1IOW-query.scw
PDB file :
Tito_Scwrl_1IOW.pdb
: