Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSPTGTGKTVAYALPTLEKIEAIPKTQW--------LVLAPSHELVMQITEVIRSWLPSDDLTVISLIGGANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMH--EIKTITLDECDQLLRQENFKSTLE-IVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDVESRDKATLLRRISHIKDMRGLVFVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKKYLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGTVITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRPPKQVQKSKKDDGKKPFRKDKPTGAAGGRKEKPTNSAKPTRNKPNKFNKKPNNFKKS |
| 2PL3 Chain:A ((41-212)) | --------------QEAQYRLVTEIQKQTIGLALQGKDVLGAAKTGSGKTLAFLVPVL---EALYRLQWTSTDGLGVLIISPTRELAYQTFEVLRKVGKNHDFSAGLIIGG--LKHEAERI-NNINILVCTPGRLLQHMDE-TVSFHATDLQMLVLDEADRILDM-GFADTMNAVIENLPKKRQTLLFSATQ-------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PL3.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -101841 for 1197 contacts (-85.1/contact) +
2D Compatibility (PS) -17332 + (NN) -9374 + (LL) 16876
1D Compatibility (HY) -11600 + (ID) 2900
Total energy: -126171.0 ( -105.41 by residue)
QMean score : 0.618
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