Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGRKTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYRLFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
4ELE Chain:D ((2-160))
IVSFMVAMDENRVIGKDNNLPWRLPSELQYVKKTTMGHPLIMGRKNYEAIGRPLPGRRNIIVTRNEGYHVEGCEVAHSVEEVFELCKNEEEIFIFGGAQIYDLFLPYVDKLYITKIHHAFEGDTFFPEMDMTNWKEVFVEKGLTDEKNPYTYYYHVYEK-
General information:
TITO was launched using:
RESULT:
Template:
4ELE.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -99885 for 1165 contacts (-85.7/contact) +
2D Compatibility (PS) -16957 + (NN) -6751 + (LL) -80
1D Compatibility (HY) -18800 + (ID) 3750
Total energy: -146223.0 ( -125.51 by residue)
QMean score : 0.639
(partial model without unconserved sides chains):
PDB file :
Tito_4ELE.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-4ELE-query.scw
PDB file :
Tito_Scwrl_4ELE.pdb
: