Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | VKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKDYNPEVLENLDKASQEFVKNTSPLSDVDSRYKYMRLATKALPSAKDIEIGDVENKKIDGPAGKIPIRIYTPQEDGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPAAVEDAYAALLWVQNHRTSLR-AKSSD-IIVAGDSVGGNLATVVTQIAKSKGKPNITAQILLYPATDI-FSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYIANASDRKYDPLVAPIRSKDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNSEATDETYELISEFLEEK |
3DNM Chain:B ((97-297)) | -----------------------------------------------------------------------------------------------------------------ILYFHGGGYISGSPSTHLVLTTQLAKQSSATLWSLDYRLAPENPFPAAVDDCVAA------YRALLKTAGSADRIIIAGDSAGGGLTTASMLKAKEDGLPMPAGLVMLSPFVDLTLSRWSNSNLADRDFLAE-----PDTLGEMSELYV-GGEDRK-NPLISPVYA-DLSGLPEMLIHVGSEEALLSDSTTLAERAGAAGVSVELKIWPDMPHVF---------------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3DNM.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89595 for 1761 contacts (-50.9/contact) +
2D Compatibility (PS) -21341 + (NN) -12470 + (LL) 10516
1D Compatibility (HY) -12000 + (ID) 4000
Total energy: -128890.0 ( -73.19 by residue)
QMean score : 0.504
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