Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MNDVLTLLRNHRSFRKYKKGVEIPEEKLDAIIRAAQAAPSWINGQHYSIIAIKDQERKNKMAELCGNQPYIAECSVFLCFVADFHRVKVASDMH-----GK----------SF-Q-IA---GEEDLLMVAATDIGLCMQNALTAAESLDYGTICIGGLRRNITATAGFLNLPEFVMPVVGLCIGVPDVEAPVKPRLPKEAVYFEETYQTDVMPLLEAYDQEIIPFSEREGFVSYTERLAKFYDRPYYPNLTEQIKERGFLGGK
3GAG Chain:A ((3-205))
MNDYLNFLDGRVSVRRFDPDAVLPNDLIKDMLEHASYAPSGNNFQPWRVVVVKNKNKQEDLKKLAALQPQVATASAVFLLFGDENAYDLTWWQEFHVQKGIITKDEAAARAERIRQYFDLHPEDKETQGLRLDVGLFAMNLMQVVRVYGYDSVPMRGV--DFDAIKTYLDMPNGWEPILMLPVGKALQAGNPHVRKSVAEFAEII----------------------------------------------------------
General information:
TITO was launched using:
RESULT:
Template:
3GAG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -145287 for 1317 contacts (-110.3/contact) +
2D Compatibility (PS) -20246 + (NN) -13776 + (LL) 3928
1D Compatibility (HY) -8000 + (ID) 1800
Total energy: -185181.0 ( -140.61 by residue)
QMean score : 0.540
(partial model without unconserved sides chains):
PDB file :
Tito_3GAG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3GAG-query.scw
PDB file :
Tito_Scwrl_3GAG.pdb
: