Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQFPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQMEK-SKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLKKINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVD-FQNKTSAIKEKVVGD-VLSNAKVY-FMLGKDETKLSKKVDEALQSIIDDGTLKKLSEKWLGADYSKEQY |
| 2YLN Chain:A ((53-281)) | ------------------------------INNKGTVTVGTEGTYAPFTYHDKDGKLTGYDVEVTRAVAEKLG-VKVEFKETQWDSMMAGLKAGRFDVVANQVGLTSPERQATFDKSEPYSWSGAVLVAHNDS--NIKSIADIKGVKTAQSLTSNYGEKAKA----AG---AQLVPVDGLAQSLTLIEQKRADATLNDELAVLDYLKKNPNAGVKIVWSAPADEKVGSGLIVNKGNDEAVAKFSTAINELKADGTLKKLGEQFFGKDIS---- |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 2YLN.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -45288 for 1863 contacts (-24.3/contact) +
2D Compatibility (PS) -23906 + (NN) -4517 + (LL) 2788
1D Compatibility (HY) -8000 + (ID) 3350
Total energy: -82273.0 ( -44.16 by residue)
QMean score : 0.544
|
|
|