Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | LDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGGQLSTLYPEKYIYDIPGYPSVRAQELVNNLIQQMKPFDPTVALEEAVQSVEKQVDGTFEIITKKDTHYSKAIIITAGNGAFEPRRLDLPEAEQYEGTNIHYFINDL-SRFSGRRVAVCGGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNNLEKSSIAIKTPFIPTEVLGNGDKLTHITLQEVKGDTTETLEIDDFIINYGFVSSLGPIKNWGLELER-NSIVVNSKMETSIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE |
| 3CTY Chain:A ((14-316)) | ----ERDFDVVIVGAGAAGFSAAVYAARSGFSVAILDKAVA-GGLTAE-APL--VENYLGFKSIVGSELAKLFADHAAN-YAKIREGVEVRSIKKTQ-GGFDIETNDDTYHAKYVIITTGT---THKHLGVKGESEYFGKGTSYCSTCDGYLFKGKRVVTIGGGNSGAIAAISMSEYVKNVTIIEYMPKYMCENAYVQEIKKRNIPYIMNAQVTEIVGDGKKVTGVKYKDRTTGEEKLIETDGVFIYVGLIPQTSFLKDSGVKLDERGYIVVDSRQRTSVPGVYAAGDVTSGN--FAQIASAVGDGCKAALSLYSDSI--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CTY.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -225781 for 2687 contacts (-84.0/contact) +
2D Compatibility (PS) -32705 + (NN) -12295 + (LL) 1736
1D Compatibility (HY) -13200 + (ID) 4000
Total energy: -286245.0 ( -106.53 by residue)
QMean score : 0.497
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