Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MGIAVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHRESIH-------KKAKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLDYLNNNVYGTQIVLEVMEEFDVKHIVFSSSAATYGEPERVPITEDMPT-NPESTYGETKLIMEKMMKWCDKAYGMKFVAL-RYFNVAGAKADGSIGEDHKP-ESHLVPIILQVALGQREKLAIYGDDYNTPDGTCIRDYVQVEDLIDAHIRALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPAEVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY |
| 1KVT Chain:A ((1-336)) | MRVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAANVKNFIFSSVATVYGDNPKIPYVESFPTGTPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHPSGDMGEDPQGIPNNLMPYIAQVAVGRRDSLAIFGNDYPTEDGTGVRDYIHVMDLADGHVVAMEKLANKPGVHIYNLGAGVGNSVLDVVNAFSKACGKPVNYHFAPRREGDLPAYWADASKADRELNWRVTRT-LDEMAQDTWHWQSRHPQGY |
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General information:
TITO was launched using:
| RESULT:
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Template: 1KVT.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -175924 for 2891 contacts (-60.9/contact) +
2D Compatibility (PS) -35576 + (NN) -18746 + (LL) -76
1D Compatibility (HY) -26000 + (ID) 6750
Total energy: -263072.0 ( -91.00 by residue)
QMean score : 0.567
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