Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | -------------------------------LAKIKVMSIFGTRP---EAIKMAPLVLALEKEPETFESTVV-ITAQHREMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHVEAG---LRTWNKYSPFPEEMNRQLTGVMADIHFSPTKQAKENLLAEGKDPATIFVTGNTAIDALKTTVQKDYHHPILENLG-DNRLILMTAHRRENLGEPMQGMFEAVREIVESREDTELVYPMHLNP------AVREKAMAILGGHERIHLI---EPLDAIDFHNFLRKSYLVFTDS-----GGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALDLLDNKESHDKMAQAANPYGDG-FAANRILAAIKSHFEETDRPEDFIV |
| 2X6Q Chain:A ((2-414)) | KMYEVKKRKLEDYKSIIGEEEVSKIQEKAEKLKGRSFVHVNSTSFGGGVAEILHSLVPLLRSIGIEARWFVIEGPTEFFNVTKTFHNALQGNESLKLT-----EEMKELYLNVNRENSKFIDLSSFDYVLVHDPQPAALIEFYEKKSPWLWRCHIDLSSPNREFWEFLRRFVEKYDRYIFH-LPEYVQPELDRNKAVIMPPSIDP----------LSEKNVELKQTEILRILERFDVDPEKPIITQVSRFDPWKGIFDVIEIYRKVKEKIPGVQLLLVGVMAHDDPEGWIYFEKTLRKIGEDYDVKVLTNLIGVHAREVNAFQRASDVILQMSIREGFGLTVTEAMWKGKPVIGRAVGGIKFQ-IVDGETGFLVRDANEAVEVVLYLLKHPEVSKEMGAKAKERVRKNFIITKHMERYLDILNSL-------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2X6Q.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -94584 for 2851 contacts (-33.2/contact) +
2D Compatibility (PS) -38726 + (NN) -18455 + (LL) 1548
1D Compatibility (HY) -16800 + (ID) 2850
Total energy: -169867.0 ( -59.58 by residue)
QMean score : 0.429
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