Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKAVGLTKASTDFV-DIEIDKPVPENHDLLVKIKAISINPVDTKQREAAKL---SGEEVRILGWDAVGEVVDTGSEVTLFQTGQDVYFAGDV------------TRPGVYAEYTLIDERLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIATQLAANTGLE-VIATASRSETVEWTKSHGANYVINHREN-IPEQLEELG-FKKGVDFILCLHNTS-AHWDEMQEAIRPQGKICSIVELTEPVEMTLLKDKSATFSYEFMFTRSKYDTADKIRQHEILTEAAHMLDKGNLT--TTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE |
| 2D8A Chain:A ((5-347)) | MVAIMKTKPGYGAELVE-VDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVGDYVSVETHIVCGKCYTKIFGVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLGNAVDTVL--AGPI---SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVMDITDGN-GVDVFLEF-SGAPKALEQGLQAVTPAGRVSLLGLYPGKVTID--FNNLIIFKALTIYG------ITGRHLWETWYTVSRLLQSGKLNLDPIITHKYKGF--DKYEEAFELMRAGK-TGKVVFML-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2D8A.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -158024 for 2686 contacts (-58.8/contact) +
2D Compatibility (PS) -33266 + (NN) -6009 + (LL) 1568
1D Compatibility (HY) -15200 + (ID) 3700
Total energy: -214631.0 ( -79.91 by residue)
QMean score : 0.494
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