Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSPISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAAGKSVLCDRFMDSSLAYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKEDITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA
3UXM Chain:C ((3-185))
---LFVTLEGPEGA---TNRDYLAERLRERGIEVQLTREPGGTPLAERIRELLLAPSDEPMAADTELLLMFAARAQHLAGVIRPALARGAVVLCDRFTDATYAYQGGGRGLPEARIAALESFVQGDLRPDLTLVFDLPVEIGLAR-AA-----LDRFEQEDRRFFEAVRQTYLQRAAQAPERYQVLDA--------------------
General information:
TITO was launched using:
RESULT:
Template:
3UXM.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -33605 for 1364 contacts (-24.6/contact) +
2D Compatibility (PS) -19121 + (NN) -10500 + (LL) 2596
1D Compatibility (HY) -11600 + (ID) 3800
Total energy: -76030.0 ( -55.74 by residue)
QMean score : 0.442
(partial model without unconserved sides chains):
PDB file :
Tito_3UXM.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3UXM-query.scw
PDB file :
Tito_Scwrl_3UXM.pdb
: