Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLIPPIHRNENGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS
2ZHG Chain:A ((10-135))
----------------ALLTPGEVAKRSGVAVSALHFYESKGLITS-IRNSGNQRRYKRDVLRYVAIIKIAQRIGIPLATIGEAFGV----TLSAKEWKQLSSQWREELDRRIHTLVALRDELDGCIG---CGCLSRSD------CPLRNP
General information:
TITO was launched using:
RESULT:
Template:
2ZHG.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -28906 for 757 contacts (-38.2/contact) +
2D Compatibility (PS) -13461 + (NN) -8053 + (LL) 1820
1D Compatibility (HY) -4800 + (ID) 1350
Total energy: -54750.0 ( -72.32 by residue)
QMean score : 0.524
(partial model without unconserved sides chains):
PDB file :
Tito_2ZHG.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2ZHG-query.scw
PDB file :
Tito_Scwrl_2ZHG.pdb
: