Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRVSQTYGLVLYNRNYREDDKLVKIFTETEGKRMFFVKHA--SKSKFNAVLQPLTIAHFILKINDNGLSYIDDYKEVLAFQETNSDLF----KLSYASYITSLADVAISDNVADAQLFIFLKKTLELIEDGL-DYEILTNIFEVQLLERFGVALNFHDCVFCHRVGLPFDFSHKYSGLLCPNHYYKDERRNHLDPNMLYLINRFQSIQFDDLQTISVK-PEMKLKIRQFLDMIYDEYV-GIHLKSKKFIDDLSSWGSIMKSD |
3Q8D Chain:A ((2-232)) | --EGWQRAFVLHSRPWSETSLMLDVFTEESGRVRLVAKGARSKRSTLKGALQPFT--PLLLRFGGRG-----EVKTLRSAEAVSLALPLSGITLYSGLYINELLSRVLEYETRFSELFFDYLHCIQSLAGVTGTPEPALRRFELALLGHLGY-------------GVNFTHCAGSGEPVDDTMTYRYREEKGFIASVVIDNKTFTGRQLKALNAREFPDADTLRAAKRFTRMALKPYLGGKPLKSRELFRQFM--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 3Q8D.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -117049 for 1647 contacts (-71.1/contact) +
2D Compatibility (PS) -23557 + (NN) -4271 + (LL) 2436
1D Compatibility (HY) -9600 + (ID) 2200
Total energy: -154241.0 ( -93.65 by residue)
QMean score : 0.400
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