Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MTKLRRFRFPLRFYFTLMFVLTMLFSVLASLLLVAAIVFTFFQGVLTTHVLQVSALAVVFLSLVIASISMWYGSYHLTKPILDISRIVSNVADGDFEGHIYRNSNRRKSYEYYNELDELSESINQMIVSLSHMDHMRKDFITNVSHELKTPIAAVANIVELLQDPELDEETQSELLGLVKTESLRLTRLCDTMLQMSRVDNQETIGELSSVRVDEQIRQAMISLTERWQAKRINFQLDS-KPYTVYSNSDLLMQVWINLLDNAIKYSDDIVDLRVRMEETNNHYLRVIISDKGRGISQYDVQHIFDKFYQADQSHNQQGNGLGLAIVKRIIVLCKGRISVSSQFEIGTEFCVELPLS |
| 1ID0 Chain:A ((3-144)) | -----------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------------LHPVAPLLDNLTSALNKVYQRKGVNISLDISPEISFVGEQNDFVEVMGNVLDNACKYCLEFV--EISARQ-TDEHLYIVVEDDGPGIPLSKREVIFDRGQRVDT--LRPGQGVGLAVAREITEQYEGKIVAGESMLGGARMEVIFGRQ |
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General information:
TITO was launched using:
| RESULT:
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Template: 1ID0.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -107123 for 1077 contacts (-99.5/contact) +
2D Compatibility (PS) -15284 + (NN) -7366 + (LL) 18804
1D Compatibility (HY) -7600 + (ID) 1750
Total energy: -120319.0 ( -111.72 by residue)
QMean score : 0.547
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