Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MSVLEIKNLHVSIEDKEILKGLNLTLKTGEIAAIMGPNGTGKSTLSAAIMGNPNYEVTAGEILFDGEDILELEVDERARLGLFLAMQYPSEVPGITNAEFIRAAMNAGKADDDKISIRQFITKLDEKMELLGMKEEMAERYLNEGFSGGEKKRNEILQLLMLEPKFALLDEIDSGLDIDALKVVSKGVNEMRG-EGFGAMIITHYQRLLNYITPDKVHVMMDGKVVLSGGPELAVRLEKEGYAQIAEELGLEYKEEV |
1V43 Chain:A ((10-231)) | MVEVKLENLTKRFGNFTAVNKLNLTIKDGEFLVLLGPSGCGKTTTLRMIAG--LEEPTEGRIYFGDRDVTYLPPK---DRNISMVFQ------HMTVYENIAFPL--KKFP-----KDEIDKRVRWAAELLQIEE-LL-NRYPAQLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMRAEIKKLQQKLKVTTIYVTHDQVEAM-TMGDRIAVMNRGQLLQIGSPTEVYLRPNSVFVATFIGAPEMNILEV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1V43.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -129378 for 1728 contacts (-74.9/contact) +
2D Compatibility (PS) -22752 + (NN) -4019 + (LL) 660
1D Compatibility (HY) -9600 + (ID) 2750
Total energy: -167839.0 ( -97.13 by residue)
QMean score : 0.553
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