Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)


Input alignment information:
Query sequenceMPKLIVSFLCILLSLTCVNSVQAEEHKDIMQITREAGYDVKDINKPKASIVID-NKGHILWEDNADLERDPASMSKMFTLYLLFEDLAKGKTSLNTTVTATETDQAISKIYEISNNNIHAGVAYPIRELITMTAVPSSNVATIMIANHLS-QNNPDAFIKRINETAKKLDMTKTHFYNPSGAVASAFNGLYSPKEYDNNATNVTTARDLSILTYHFLKKYPDILNYTKYPEVK--AMVGTPYEETFTTYNYSTPGAKFGLEGVDGLKTGSSPSAAFNALVTAKRQNTRLITVILGVGDWSDQDGEYYRHPFVNALVEKGFKDAKNISSKTPVLKAVKPKKEVTKTKTKSIQEQPQTKEQWWTKTDQFIQSHFVSILIVLGTIAILCLLAGIVLLIKRSR
1HD8 Chain:A ((3-262))-------------------------------LNIKTMIPGVPQIDAESYILIDYNSGKVLAEQNADVRRDPASLTKMMTSYVIGQAMKAGKFKETDLVTIG---------------NLKPGMQVPVSQLIRDINLQSGNDACVAMADFAAG--SQDAFVGLMNSYVNALGLKNTHFQTVHG---------------LDADGQYSSARDMALIGQALIRDVPNEYSIYKEKEFTFN-----G-----IRQLNRNGLLWDNSLNVDGIKTGHTDKAGYNLVASATEGQMRLISAVMGGRT------FKGREAESKKLLTWGFRFFETVNPLKVGKEFASEPVWFGDSDRASLGVDKDVYLTIPRGRMKDLKASYVLNSSELHAPLQKNQVVGTINFQLDGK


General information:
TITO was launched using:
RESULT:

Template: 1HD8.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output 		3D Compatibility (PKB) -90632 for 2017 contacts (-44.9/contact) +
2D Compatibility (PS) -25801 + (NN) -14582 + (LL) 5872
1D Compatibility (HY) -10800 + (ID) 3200
Total energy: -139143.0 ( -68.99 by residue)
QMean score : 0.466

(partial model without unconserved sides chains):
PDB file : Tito_1HD8.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1HD8-query.scw
PDB file : Tito_Scwrl_1HD8.pdb: