Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTENRKKLVEVKNVSLTFNKGKANEVRAIDNVSFDIYEGEVFGLVGESGSGKTTVGRSILKLYDISDGEITFNGEVISHLKGKA-LHSFRKDAQMIFQD----PQASLNGRMKIRDIVAEGLDIHKLAKSKSDRDSKVQALLDLVGLNKDHLTRYPHEFSGGQRQRIGIARALAVEPKFIIADEPISALDVSIQAQVVNLMQKLQREQGLTYLFIAHDLSMVKYISDRIGVMHWGKLLEVGTSDDVYNNPIHPYTKSLLSAIPEPDPESERQRVHQPYNPAIEQDGQERQMHEITPGHFVLSTPQEAEEYKKQIL
4YMU Chain:A ((14-239))-------------------------LEVLKGVTLKVNKGEVVVIIGPSGSGKSTLLRCINLLEEPTKGEVFIDGVKINN--GKVNINKVRQKVGMVFQHFNLFPHLT-----AIENITLAPVKVKKMNKKEAEELA--VDLLAKVGL-LDKKDQYPIKLSGGQKQRLAIARALAMQPEVMLFDEPTSALDPEMVKEVLNVMKQLANE-GMTMVVVTHEMGFAREVGDRVIFMDDGVIVEEGTPEEIFYRAKNERTREFLSKIL----------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 4YMU.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -109402 for 1747 contacts (-62.6/contact) +
2D Compatibility (PS) -23465 + (NN) -3739 + (LL) 5308
1D Compatibility (HY) -18800 + (ID) 3800
Total energy: -153898.0 ( -88.09 by residue)
QMean score : 0.462

(partial model without unconserved sides chains):
PDB file : Tito_4YMU.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4YMU-query.scw
PDB file : Tito_Scwrl_4YMU.pdb: