Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MRIFEKAP---AKLNLGLDIKGRCDDGYHELAMIMVSIDLNDYVTISELKEDCIVIDSDSSKMPLN-NDNDVFKAADIIKNQYGINKGVHIRLEKSIPVCAGLGGGSTDAAATIRALNRLWNLQMDYDEMVAIGFKIGSDV---------PYCLGGGCSLVLGKGE-IVKPLPTLRPCWIVLVKPDFGISTKSIFR------DIDCKSISRVDIDLLKSAILSSDYQLMVKSMGN--SLEDITITKNPVISTIKERMLNSGADVALMTGSGPTVFSMCSTEKKADRVFNSMKGFCKEVYKVRLLR----- |
1H72 Chain:C ((1-296)) | MKVRVKAPCTSANLGVGFD------------VFGLCLKEPYDVIEVEAIDDKEIIIEVDDKNIPTDPDKNVAGIVAKKMIDDFNIGKGVKITIKKGVKAGSGLGSSAASSAGTAYAINELFKLNLDKLKLVDYASYGELASSGAKHADNVAPAIFGGFTMVTNYEPLEVLHIPIDFKLDILIAIPNISINTKEAREILPKAVGLKDLVNNVGKACGMVYALYNKDKSLFGRYMMSDKVIEPVRGKLIPNYFKIKEEVKDK-VYGITISGSGPSIIAFPK-EEFIDEVENILRDYYENTIRTEVGKGVEVV |
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General information:
TITO was launched using:
| RESULT:
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Template: 1H72.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -160495 for 2307 contacts (-69.6/contact) +
2D Compatibility (PS) -29068 + (NN) -7698 + (LL) 224
1D Compatibility (HY) -9600 + (ID) 2950
Total energy: -209587.0 ( -90.85 by residue)
QMean score : 0.481
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