Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MQLKDKNIFITGSSRGIGLAIAHQFAQLGANIVLNGRSEISEDLIAEFADYGVKVIAIS-GDVSSFEDANRMIKEAIASLGSVDVLVNNAGITNDKLMLKMTVEDFESVLKINLTGAFNMTQSVLKPMTKARQGAIINISSVVGLTGNVGQANYAASKAGLIGFTKSVAREVAARGIRVNAIAPGFIESDMTDVIPEKMQEAILAQIPMKRIGKGKEVAQVASFLAEQE--YLTGQVIAIDGGMTMQ
1Q7B Chain:D ((2-243))
-NFEGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIR---AEFGEVDILVNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVGTMGNGGQANYAAAKAGLIGFSKSLAREVASRGITVNVVAPGFIETDMTRALSDDQRAGILAQVPAGRLGGAQEIANAVAFLASDEAAYITGETLHVNGGMYMV
General information:
TITO was launched using:
RESULT:
Template:
1Q7B.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -113946 for 2032 contacts (-56.1/contact) +
2D Compatibility (PS) -25846 + (NN) -5055 + (LL) 660
1D Compatibility (HY) -17600 + (ID) 5500
Total energy: -167287.0 ( -82.33 by residue)
QMean score : 0.557
(partial model without unconserved sides chains):
PDB file :
Tito_1Q7B.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-1Q7B-query.scw
PDB file :
Tito_Scwrl_1Q7B.pdb
: