Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKVRKAVIPAAGLGTRFLPATKALAKEMLPIVDKP-TIQFIVEEALKSGIEDILVVTGKSKRSIEDHFDSNFELEYNLKEKGKNELLKLVDETTGIRLH---FIRQSHPRGLGDAVLQAKAFVG---NEPFVVMLGDDLMDITNNKVIPLTKQLINDFEAT-HASTIAVMEVPHEDVSAYGVIAPQGEGVNGLYSVNTFVEKPSPEE-----APSNLAIIGRYLLTPEIF-NILETQKP-GAGNEIQLTDAIDTLNKTQRVFA-----------RKFTGDRYDVGDKFGFMKTSIDYALQHPQVKDDLKKYIIDLGKSLEKTSKK |
3BRK Chain:X ((10-288)) | ARDAMAYVLAGGRGSRLKELTDRRAKPAVYFGGKARIIDFALSNALNSGIRRIGVATQYKAHSLIRHLQRGWDFFRPE------------RNE-SFDILPAS-----WYEGTADAVYQNIDIIEPYAPEYMVILAGDHIYKM-------DYEYMLQQHVDSGADVTIGCLEVPRMEATGFGVMHVNE-----KDEIIDFIEKPADPPGIPGNEGFALASMGIYVFHTKFLMEAVRRDAAD----------IIPYIVEHGKAVAHRFADSCVRSDFEHEPYWRDVGTIDAYWQANIDLTDVVPDLDIYDKSWPIWTYAEITPPAKF |
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General information:
TITO was launched using:
| RESULT:
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Template: 3BRK.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -118256 for 1836 contacts (-64.4/contact) +
2D Compatibility (PS) -25010 + (NN) -6217 + (LL) 1896
1D Compatibility (HY) -12400 + (ID) 2650
Total energy: -162637.0 ( -88.58 by residue)
QMean score : 0.456
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