Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MAKERVDVLAYKQGLFDTREQAKRGVMAGMVINVINGERYDKPGEKVADDTELKLKGEKLKYVSRGGLKLEKALQVFEISVADKLTIDIGASTGGFTDVMLQSGARLVYAVDVGTNQLVWKLRQDHRVRSMEQYNFRYAQKED----FKEGLPEFASIDVSFISL-----NLILPALKEILVDGGQVVALIKPQFEAGREQIG-KNGIVKDKLVHEKVLTTVTNFTKDYGYTVKHLDFSPIQGGHGNIEFLMHLQKCQDPQNLVLDQIQDVIEKAHKEFKKNEEE |
| 3UJC Chain:A ((54-206)) | --------------------------------------------------------------------------------NENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMA-NERVSGN----NKIIFEANDILTKEFPENNFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITD-YCATEKENWDDEFKEYVKQRKYTLITVEEYADILTACNFKNVVSKDLSDYWNQLLEVEHKYLHENKEEFLKLFSEKKFISLDDGWSRKIKDSK |
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General information:
TITO was launched using:
| RESULT:
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Template: 3UJC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -36295 for 1028 contacts (-35.3/contact) +
2D Compatibility (PS) -14509 + (NN) 2356 + (LL) 6616
1D Compatibility (HY) -2400 + (ID) 750
Total energy: -44982.0 ( -43.76 by residue)
QMean score : 0.363
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