Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | ----MDIKAEIQKLAKEIGISKIGFTTADNFDYLEKSLRASVEEGRNSGFEHKVIEDRIYPERLLESAKTIIS--IGVAYPHKLPQQPQKTSYKRGKITPNSWGLDYHYVVGEKLDRLSKGIEELCRDFPLQQKAMVDTGALVDTAVAQRAGIGFIGKNGLVISKEYGSYMFLGELITNLEIEPDKPVDYDCGDCRRCLDACPTSCLI--------GDGSMNAKRCLSFQTQDKGMMDIEFRKKIKTVIY--GCDICQICCPYNKGINNPLATEIDPELAQPELIPFLSLSNGQFKEKFGMIAGSWRGKNILQRNAIIA-LANAHDKTAVVKLIEIIDKNNNPI------------------------HTATAIWALGEIVKKPNDEILEFMSNLTLKD-EDSRKELELIRHKWQF--- |
4WZI Chain:A ((85-576)) | VTPFAQVLASLRSVRNNFTIQKLAMETLEELDWALDQLETIQTYRSVSEMASNKFKRMLNRELTHLSEMSRCGNQVSEYISNTFLDKENEDHLAKELEDLNKWGLNIFNVAGYSHNR---PLTAIMYAIFQERDLLKTFRISSDTFITYMMTLEDHYHSDV----AYHNSLHAADVAQSTHVLLSTPALDAVFTDLEILAAIFAAAIHDVDHPGVSNQFLINTNSELALMYNDESVLENHHLAVGFKLLQEEHADIFMNLTKKQRQTLRKMVIDMVLATDMSKHMSLLADLKTMVETKKVTSSGVLLLDNYTDRIQVLRNMVHAADLSNPTKSLELYRQWTDRIMEEFFQQGDKERERGMEISPMADKHTACVEKSQVGFIDYIVHPLWETWADLVQPDAQDILDTLEDNRNWYQAMIP |
|
General information:
TITO was launched using:
| RESULT:
|
Template: 4WZI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
|
3D Compatibility (PKB) -41729 for 2633 contacts (-15.8/contact) +
2D Compatibility (PS) -38041 + (NN) -4857 + (LL) 644
1D Compatibility (HY) -6000 + (ID) 2400
Total energy: -92383.0 ( -35.09 by residue)
QMean score : 0.136
|
|
|