Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQTKKEFILGLTIIITLTLLIMLIFLVMFNKSSNSKLKQTKDRRVLSTSTTRTSSSSHDQKIVEKSLEKKKMVMEQDMELMNAYRLYYDYAHLSLKEVVLAYMSEYGIEKNSVAFSYKNLKTGQRDAMNDTQAMTAGSTYKLPLNMLVVDAVVKGKLSMEERFDITETDY-EYIGEHNNYVAAFSGAMSIDDMQKYSLVYSENTPAYALAERIGGMDSAYSKFGRYGQSKGDIKNI---------QKNGNKVTTDYYIQVLDYLWKHR----KKYDSLITYLEEAFPTDYYRALIPSDVVVAQKPGYV-REALNVGAIVK-E-EVPYIVAIYTAGLGGS--TQEDSEINGVGLYQLEQLCFVINQWHRVNMN |
| 2CC1 Chain:A ((28-291)) | ----------------------------------------------------------------------------------------------PIDDQLAELERRD---NVLIGLYAANLQSGRRITHRPDEMFAMCSTFKGYVAARVLQMAEHGEISLDNRVFVDADALVPNSPVTE--ARA-GAEMTLAELCQAALQRSDNTAANLLLKTIGGPAAVTAFARSVGDERTRLDRWEVELNSAIPGDPRDTSTPAALAVGYRAILAGDALSPPQRGLLEDWMRANQTS-SMRAGLPEGWTTADKTGSGDYGSTNDAGIAFGPDGQRLLLVMMTRSQAHDPKAENLRPL----IGELTALVLPSLL------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2CC1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -110765 for 2082 contacts (-53.2/contact) +
2D Compatibility (PS) -25177 + (NN) -577 + (LL) 9144
1D Compatibility (HY) -1600 + (ID) 1800
Total energy: -130775.0 ( -62.81 by residue)
QMean score : 0.336
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