Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MFKFLKRLIALIIIIFIGYRLVIIHENVKKVLQYHDLVQNTLAENGSEANVHLVLSMIYTET---------KGDAIDVMQSSESISGTTNSI------------TDSHTSIKHGVTLLSQNISQAKKAKVDVWTAVQAYNFGSSYIDYVADHGGENSIELAKNYSKNVVAPSLGNYNGDTYFYYHPLALISGGKLYKNGGNIYYSREVQFNLYLIKIMELF |
1QSA Chain:A ((451-618)) | -------------------------------LAYNDLFKRYTSGKE--IPQSYAMAIARQESAWNPKVKSPVG-ASGLMQIMPGTATHTVKMFSIPGYSSPGQLLDPETNINIGTSYLQYVYQQFG---NNRIFSSAAYNAGPGRVRTWLGNSAGRI-------DAVAFVESIPFSETRGYVKNVLAYDAYYRYFMGDKPTLMSATEWGRRY--------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QSA.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -64326 for 1173 contacts (-54.8/contact) +
2D Compatibility (PS) -14540 + (NN) 5560 + (LL) 6440
1D Compatibility (HY) -2000 + (ID) 1150
Total energy: -70016.0 ( -59.69 by residue)
QMean score : 0.229
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