Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MVKQVFPKGFLWGGATAANQCEGAYNVDGRGLANVDVVPTGEDRFAIISGQKKMFDFEEGYFYPAKESIDFYHHYKEDLALLAEMGFKTYRMSIAWTRIFPKG-DELYPNEAGLRFYENIFKECRKYGIEPLVTITHFDCPIYLIKHYGGWRSRKMIGFYERLVRALFTRFKGLVKYWLTFNEINMILHAPFMGAGLYFEDGENQEQIKY------QAAHHELVASAIAVKIAHEVDPNNQIGCMLAAGQYYP-NTCHPQDYWAS-MQKNRENYFFIDVQTRGKYPNYAKKYFEHL----GISIQMTAEDLALL---RDYTVDFISFSYYSS-------------RVASGNPTVSEQVQENIFASLKNPYLKSSEWGWQIDPLGLRITLNAIWDRYQ--KPMFIVENGLGAVDIPDENGYVEDDYRIDYLRQHIAAMRDAIYVDGVNLIGYTTWGCIDLVSAGTGEMEKRYGFIYVDRNNKGEGTLKRYKKKSFYWYKKVIASNGSQIE |
| 2PBG Chain:A ((1-464)) | -MTKTLPKDFIFGGATAAYQAEGATHTDGKG-------PVAWDKY-----------LEDNYWYTAEPASDFYHKYPVDLELAEEYGVNGIRISIAWSRIFPTGYGEV--NEKGVEFYHKLFAECHKRHVEPFVTLHHFDTPEALHSN-GDFLNRENIEHFIDYAAFCFEEFPE-VNYWTTFNEIGPI------GDGQYLV-GKFPPGIKYDLAKVFQSHHNMMVSHARAVKLYKDKGYKGEIGVVHALPTKYPYDPENPADVRAAELEDIIHNKFILDATYLGHYCDKTMEGVNHILAENGGELDLRDEDFQALDAAKDLN-DFLGINYYMSDWMQAFDGETEIIHNGKGEKGSSKYQIKGVGRRVAPDYVPRTDWDWIIYPEGLYDQIMRVKNDYPNYKKIYITENGLGYKDEFVDNT-VYDDGRIDYVKQHLEVLSDAI-ADGANVKGYFIWSLMDVFSWSNG-YEKRYGLFYVDFD-----TQERYPKKSAHWYKKLAETQVIE-- |
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General information:
TITO was launched using:
| RESULT:
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Template: 2PBG.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -234892 for 3719 contacts (-63.2/contact) +
2D Compatibility (PS) -45550 + (NN) -13857 + (LL) 2492
1D Compatibility (HY) -28400 + (ID) 8550
Total energy: -328757.0 ( -88.40 by residue)
QMean score : 0.474
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