Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MYLKSLSIKNYRKYGEEVQTINFAHSKWSEMSGAEDESEKINRTEEYISKSSSLIVGKNNSGKSTIVKLLNTLQNTKSGSRNIFKYTDFNLKMLSDWYRFNIDNKSKEDIESIDKSDFPKLEFQLILGIDDENDLISSFEDILILGGIETVGTHENQEVAEVTIDVKYEVADVQSFLEELVKIKSSPREKIEQYDQGYQKELRYRKFLSLFSSNYFVLNFYPIRRDEPAKEFSLSSLLKVATIEANTVKNDKTLSQAYNKIVSTYIKNNDIVEIDSLVGDINYQVKDMVDTNIKDILQSAVSSIESTKNLKMNLHPDVTLEKIFANSIIYEYQEGNNNIPESQFGMGYTNLMVIIAKIVDYIELYSEKDINGSVNILCIEEPESFMHPQMQELFIKNISKAIATLLGKKQQLDTFQIIITTHSTHILNSKIQSGNTLNNISYLGQVGVNNIIKNVSDDKIASGRDIDKKAYEYIKKYLRLEITDIFFADAVVLVEGVSEETYLRYEIDRHSILKNHHVKVYRIDGAYAHQFISLLDLLGVRTVIFTDLDLKRSESEKKVDIKDNAEPDVIPSNIPDLEEKYGGVASSLTTNGTIQYFVKKLLNDDKAKYDKINSKIIEILTDKEELVVEYNNISMYSQGKINKYYATSFEEAIVLTNAGNEDENKYKKSLIKALQYVHPNMRYFGDIDETSEIADKSYMYQVKLSDGKSKFSTGIVYLSITDKEFSLKRPQYVESGLNLLCGYFEE----- |
3CE2 Chain:A ((11-610)) | QVRPRSEISPQDCWDIT--------PLYLNRKAWKADLDSFGLKSPTWPALQATQYQLDN--SESLLSLLTTLFSIERKLNKLYVYAHLTHDQ------------------DITNQEGIADLKSITHLHTLFAEETSWVQPALTSLSESLIAQHLSAP----------CLAPYRFYLEKIFRLSIHTGTPGEEKILASAFTPLEVASKAFSSLSDSEIPFGQAT-DSEGNSHPLSHALASLYMQS---TDRELRKTSYLAQCERYHSY------------------------RHTFANLLNGKIQAHVFYAKNKRYNSCLQAALYH----------NNIPTTVYTNLIDIVKKNSSLITKYFSIKQRCLNLKDFHFYDVYAPLSQEKKYTFQEAVDLIYTSLSPL--GTEYIDTLKQGLT--TQGWVDKYENLNKRSGAYSSGCYDSHPYVLLNYTGT-LYDVSVIAHEGGHSMHSYFSRKHQPFHDAQYPIFLAEIASTLNEMLLMDSMLKESDSKEEKITILTRCLDTIFSTL----FRQVLFASFEYDIHHAAEH---GVPLTEEYLSSTYKNLQNEFYG----------------------------------EIITFDVLSNIEWARIPHFYYNFYVYQYATGIIAALCFLEKILNNEDNALNSYLNFLK------------------------------SGGSDFPLEILKKSGLD----MGTVEPIQKAFCFIEKKIQELSSLI |
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General information:
TITO was launched using:
| RESULT:
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Template: 3CE2.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) 4551 for 4718 contacts (1.0/contact) +
2D Compatibility (PS) -60304 + (NN) 2932 + (LL) 10108
1D Compatibility (HY) -10000 + (ID) 3650
Total energy: -56363.0 ( -11.95 by residue)
QMean score : 0.219
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