Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKNLNLLMKPKTSSKQKKEKTKKREVLPTTLNTLAYQGLFPNGLMQVSPDYFSQSYLLGDVNYQTVGLEEKEAIVEKYSNLINSLDDKTNFQLTIFNKKVNLEQFRKSVLYPLQEDGFD-----------SYREELNRMMDSNLEAGENNFSAVKLISFGKSDQAPKLAYRSLSQIGEYFKSGLSEIEASFTLLTGEERVNNLADMLRGENHLPFTYKDLVLSGQTTKHFIAPTSISFKHKNHIEIDNRLLQIVYVRDYGMELGDKFIRELMQSDLEVVISLHAKGSTKSEAMKKLRTKKTLMESQKIGEQQKMARSGIYLDKVGHALESNIDEAEDLLKTMTQTGDKLFDTVFLIGFFADNEEQLKQSLDIIKQVAGSNDLIIDNLTYMQEAALNSLLPFGKNCLEGVSRSLLTSNIAVNSPWTSVDLQDAGGKFYGINQISSNIITIDRGKLNTPSGLILGTSGSGKGMATKHEIISTKLKEADKDTEIIIVDPENEYSVSGQAFGGEIIDIAPDSRTFLNVLDLSDDNLDEDPVKVKSEF--LLSWIGKLLDRKMDGREKSIIDRVTRLTYKHFEEPSLVEWVFVLSQQPEQEARDLALDMELYVEGSLDIFSHKTTIQTDSHFLIYNVKKLGDELKQIALMVIFDQIWNRVVKNQKLGKKTWIYFDEMQLLLLDQFASDFFFKLWSRVRKYGATPTGITQNVETLLLDANGRRIIANSEFMILLKQAKSDREELVHMLGLSKE-LEKYLVNPEKG--AGLIKAGSTVVPFRNKIPHQTKLFDIMSTDPDKMRT |
| 4Y21 Chain:A ((1-539)) | -----------GKERFVKLLDQLHNSLRIDLSM--YRNNFPASSPERLQDLKSTVDLLTSITFFRMKVQELQSPPRASQVVKDCVKACLNSTYEYIFNNCHELYGREYQTDPAKKGEVPPEEQGPSIKNLDFWSKLITLIVSIIEEDKNSYTPCLNQFPQELNVGKISAEVMWSLFAQDMKYAMEEHDKH--------RLCKSADYMNLHFKVKWLYNEYVAELPTFKD-------------------------RVPEYPAWF-EPFVIQWLDENEEVSRDFLHG-----------------------------------------ALERDKKDG------FQQTSEHALFSCSVVDVF----SQLNQSFEIIKKLECPDPQIVGHYMRRFAKTISNVL---LQYADIVSKDFASY--------------------------------------------------CSKEKEKVPCILMNNTQQLRVQLEKMFEA-----------MGGKELD------------AEASGTLKELQVKLNNVLDELSHVFATSFQPHIEECVRQMGDILSQVKGTGNVPASA-------CSSVAQDADNVLQPIMDLLDSNLTLFAKIC-----------------------------------------------------EKTVLKRVLKELWKLVMNTMERTIVLPPEFSKLKDHMVRE-----------------EAKSLTPKQCAVVELALDTIKQYFHAGGVGLKKTFLEKSPDLQSLRYALSLYTQ-------ATDLLIK |
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General information:
TITO was launched using:
| RESULT:
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Template: 4Y21.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -27730 for 3853 contacts (-7.2/contact) +
2D Compatibility (PS) -54807 + (NN) -14385 + (LL) 17984
1D Compatibility (HY) -21600 + (ID) 3950
Total energy: -104488.0 ( -27.12 by residue)
QMean score : ?
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