Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MDGKSISVKSYANIAIIKYWGKADA----EKMIPATSSISLTLE--NMYTETRLTTLGKDAKKDEFYISGVLQNDHEHDKMSAILDRFRQNK-----SGFVKIETTNNMPTAAGLSSSSSGLSALVKACNDFFGTNLSQSQLAQEAKFASGSSSRSFFGPVAAWDKDSGD-----IYK-V----HTDLDLAMIMLVLNDKRKPI-SSREGMKICTETSTTFNEWVR-QSEQDYQDMLVYLKNNDFQKVGQLTERNALAMHSTTKTATPAFSYLTEETYKAMDVVKKLREK--GHECYYTMDAGPNVKVLCLRQDLEALAAILEKDYRIIVSTTKELADG |
| 2HKE Chain:A ((4-318)) | ---QCVTVEAPINIAFIKYWGKREGGETLILP--TNDSFSITLSASPFRSKTSVELRDD-IETDTLRLNGTEVDVGKTPRVQSMLLHLRSTCPEELKNKKVNIVSENNFPTAAGMASSASGYCAMSAALIRAFK---STTNVSMLARLGSGSACRSAFGGFVIWNKGEKPDGSDCVATQFVDETHWP-EIQVMCAVLKGAQKDVSSTKGMQQSL-KTSPLMKKRISETVPERMKIASRAIKARDFATFAEIAMLESDDLQEICATTEPKITYATEDSYAMIRLVKAYNAKKGRTALAYTFDAGANCFLFVLKEDLPEAVAMLMEHFPTPFEKFFFGDRE |
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General information:
TITO was launched using:
| RESULT:
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Template: 2HKE.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -79472 for 2424 contacts (-32.8/contact) +
2D Compatibility (PS) -31725 + (NN) -13353 + (LL) 324
1D Compatibility (HY) -17600 + (ID) 3800
Total energy: -145626.0 ( -60.08 by residue)
QMean score : 0.478
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