Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSDFLVDGLTKSVGDKTVFSNVSFIIHSLDRIGIIGVNGTGKTTLLDVISGELGFDGDRSPFSSANDYKIAYLKQEPDFDDSQTILDTVLSSDLREMALIKEYELLLNHYEESKQSRLEKVMAEMDSLDAWSIESEVKTVLSKLGITD--LQLSVGELSGGLRRRVQLAQVLLNDAD--LLLLDEPTNHLDIDTIAWLTNFLKNS---KKTVLFITHDRYFLDNVATRIFEL------DKAQITEYQGNYQDYVRLRAEQDERDAASLHKKKQLYKQELAWMRTQPQARATKQQARINRFQNLKNDLHQTSDTSDLEMTFETSRIGKKVINFENVSFSYPDKSILKDFNLLIQNKDRIGIVGDNGVGKSTLLN---------------LIVQDLQPDSGNVSIGETIRVGYFSQQLH--------------------NM-----------------------------------------D-------------------------------GSKRVINYLQEVADEVKTSVGTTSVTELLEQFLFPRSTHGTQIAKLSGGEKKRLYLLKILIEKP---NVLLLDEPTNDLDIATLTVLENFLQGF---GGPVITVSHDRYFLDKVANKIIAF------EDNDIREFFGNYTDYLDEKAFNEQNNEVISKKESTKTSREKQSRKRMSYFEKQEWATIEDDIMILENTITRIENDMQTCGSDFTRLSDLQKELDAKNEALLEKYDRYEYLSELDT |
| 3PIH Chain:A ((355-902)) | ---------------VPKVQRWHRET---EMKEWLEKNFIVQRTCSVCGGRRLNRE--ALSVKING-LNIHE-------FTELSISEELEFLKN-LNL-TER-E-------------REIVGELL-----KEIEK-RLEFLVDVGLEYLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRDTERLIKTLKKLRDLGNTVIVVEHDEEVIR-NADHIIDIGPGGGTNGGRVVFQ-GTVDELLKNPDSSL----------------TGEYLS------------------GK---R---K----ITVN-KTRRLPYASLKIKGVR-----HNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLYPALMNLLHKTKLPAGEFDSIEGHENIDK---MIAIDQSPIGRTPRSNPATYTKVFDEIRSLFAMTPAAKARGYNKSRFSFNLKGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRETLEITYKGKNISDILDMTVDEALEFFKN----IPSIKRTLQVLHDVGLGYVKLGQPATTLSGGEAQRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVLHRLVDRGNTVIVIEHNLDVIK-NADHIIDLGPEGGKEGGYIV-ATGTPEEIAKNPHSYTGRFLKNVL------------------------------------------------------------------------------------ |
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General information:
TITO was launched using:
| RESULT:
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Template: 3PIH.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -89453 for 2994 contacts (-29.9/contact) +
2D Compatibility (PS) -43479 + (NN) -11590 + (LL) 12872
1D Compatibility (HY) -14400 + (ID) 4150
Total energy: -150200.0 ( -50.17 by residue)
QMean score : 0.282
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