Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSKQYDYIVIGGGSAGSGTANRAAMYGAKVLLIEGGQ---------VGGTCVNLGCVPKKIMWYGAQVSETLHKYSSGYGFEVNNLNFDFTTLKANRDAYVQRSRQSYAANFERNGVEKIDGFARFIDNHTIE--VNGQQYK-----APHITIATGGHPLYPDII--GSELGETSDDFFGWETLPDSILIVGAGYIAAELAGVVNELGVETHLAFRKDHILRGFDDMVTSEVMAEMEKSGISLHANHVPKSLKRDEGGKLIFEAENGKTLVVDRVIWAIGRGPNVD-MGLENTDIVLN-DKGYIKTDEFENTSVDGVYAIGDVNGKIA-LTPVAIAAGRRLSERLFNHKDNEKLDYHNVPSVIFTHPVIGTVGLSEAAAIEQFGEDNIKVYTSTFTSMYTAVTTNRQAVK---MKLITLGKEE-KVIGLHGVGYGIDEMIQGFSVAIKMGATKADFDDTVAIHPTGSEEFVTMR |
| 4B1B Chain:A ((43-506)) | ----YDYVVIGGGPGGMASAKEAAAHGARVLLFDYVKPSSQGTKWGIGGTCVNVGCVPKKLMHYAGHMGSIFKLDSKAYGWKFDNLKHDWKKLVTTVQSHIRSLNFSYMTGLRSSKVKYINGLAKLKDKNTVSYYLK--LSKEETVTGKYILIATGCRPHIPDDVEGAKELSITSDDIFSLKKDPGKTLVVGASYVALECSGFLNSLGYDVTVAVR-SIVLRGFDQQCAVKVKLYMEEQGVMFKNGILPKKLTKMD-DKILVEFSDKTSELYDTVLYAIGRKGDIDGLNLESLNMNVNKSNNKIIADHLSCTNIPSIFAVGDVAENVPELAPVAIKAGEILARRLFKDSD-EIMDYSYIPTSIYTPIEYGACGYSEEKAYELYGKSNVEVFLQ-----------------TCLAKLVCLKNEDNRVIGFHYVGPNAGEVTQGMALALRLKVKKKDFDNC--------------- |
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General information:
TITO was launched using:
| RESULT:
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Template: 4B1B.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -232378 for 3479 contacts (-66.8/contact) +
2D Compatibility (PS) -44500 + (NN) -9256 + (LL) 2852
1D Compatibility (HY) -38400 + (ID) 7600
Total energy: -329282.0 ( -94.65 by residue)
QMean score : 0.551
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