Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MKQSKMLIPTLREMPSDAQVISHALMVRAGYVRQ--VSAGIYAYLPLANRTIEKFKTIMRQEFEKIGAVEMLAPALLTADLWR-ESGRYETYGEDLYKLKNR----DQSDFILGPTHEETFTTLVRDAVKSYKQLPLNLYQIQSKYRDEKRPRNGLLRTREFI-MKDGYSFHKDYEDLDVTYEDYRKAYEAIFTRAGLDFKGIIGDGGAMGGKDSQEFMAVTPNRTDLNRWLVLDKTIPSIDDIPEDVLEEIKVELSAWLVSGEDTIAYSTESSYAANLEMATNEYKPSTKAATFEEVTRVETPNCKSIDEVAGFLSIDENQTIKTLLFIADEQPVVALLVGNDQVNDVKLKNYLAADFLEPASEEQAKEIFGAGFGSLGPVNLPDSVKIIADRKVQDLANAVSGANQDGYHFTGVNPERDFTAEYVDIREVKEGEISPDGKGTLKFARGIEIGHIFKLGTRYSDSMGANILDENGRSNPIVMGCYGIGVSRILSAVIEQHARLFVNKTPKGAYRFAWGINFPEELAPFDVHLITVNVKD--QESQDLTEKIEADLMLKGYEVLTDDRNERVGSKFSDSDLIGLPIRVTVGKKASE-GIVEVKIKASGDTIEVHADNLIETLEILTKK |
| 1NJ1 Chain:A ((41-413)) | ------------------SEWFHNILEEAEIIDQRYPVKGMHVWMPHGFMIRKNTLKILRRILD-RDHEEVLFPLLVPEDELAKEAIHVKGFEDEVYWVTHGGLSKLQRKLALRPTSETVMYPMFALWVRSHTDLPMRFYQVVNTFRYETKHTRPLIRVREITTFKEAHTIHATASEAEEQVERAVEIYKEFFNSLGIPYLITRRPP--------------------------------------------------------WDKF------------------------------------------------PG---------------------------------------SE-----------Y------------------------------------------------TVAFD------------TLMPD-------GKTLQIGTVHNLGQTFARTFEIKFETPEGDHEYVHQTCYGLS-DRVIASVIAIHGD-------------ESGLCLPPDVAAHQVVIVPIIFKKAAEEVMEACRELRSRLEAAGFRVHLDDRDIRAGRKYYEWEMRGVPLRVEIGPRDLEKGAAVISRRDTGEKVTADLQGIEETLRELMKD |
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General information:
TITO was launched using:
| RESULT:
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Template: 1NJ1.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -127979 for 2923 contacts (-43.8/contact) +
2D Compatibility (PS) -38701 + (NN) -8357 + (LL) 15968
1D Compatibility (HY) -18400 + (ID) 4050
Total energy: -181519.0 ( -62.10 by residue)
QMean score : 0.416
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