Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MKIKEIIVVEGRDDTARIKLAVDADTIETNGSAIDDHVIDQIRLAQKTRGVIILTDPDFPGEKIRKTISEAVPGCKHAFLPKHLA--KPKNKRGIGVEHASVESIRACLENVHEEMEAQPSD-ISAEDLIHAGLIGGPAAKCRRERLGDLLKIGYT--NGKQLQKRLQMF-----QIKKSDFMSALDTVMREEQNE
2A9S Chain:A ((3-169))
--------------------------MSLFPGDIEELARRIITDFTPLGLMVSTAES-CTGGLIAGALTE-IAGSSAVVDRGFVTYTNDAKRDMLGVGTETLTTFGAVSRQTALQMAHGALYRSRANFAVAVTGIAGPGGGSAEKPVG-LVHLATKARNGNVLHHEMRYGDIGRTEIRLATVRTALEMLIALNQAG
General information:
TITO was launched using:
RESULT:
Template:
2A9S.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -11689 for 1340 contacts (-8.7/contact) +
2D Compatibility (PS) -16742 + (NN) -4064 + (LL) 2428
1D Compatibility (HY) -6000 + (ID) 1150
Total energy: -37217.0 ( -27.77 by residue)
QMean score : 0.288
(partial model without unconserved sides chains):
PDB file :
Tito_2A9S.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-2A9S-query.scw
PDB file :
Tito_Scwrl_2A9S.pdb
: