Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
MFRIGQGFDVHQLVEGRPLIIGGIEIPYEKGLLGHSDADVLLHTVADACLGAVGEGDIGKHFPDTDPEFKDADSFKLLQHVWGIVKQKGYVLGNIDCTIIAQKPKMLPYIEDMRKRIAEGLEADVSQVNVKATTTEKLGFTGRAEGIAAQATVLIQKG
3F0G Chain:B ((24-179))
-FRIGQGYDVHQLVPGRPLIIGGVTIPYERGLL--SDADVLLHAITDALFGAAALGDIGRHFSDT--RFKGADSRALLRECASRVAQAGFAIRNVDSTIIAQAPKLAPHIDAMRANIAADLDLPLDRVNVKAKTNEKLGYLGRGEGIEAQAAALVVR-
General information:
TITO was launched using:
RESULT:
Template:
3F0G.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -116579 for 1281 contacts (-91.0/contact) +
2D Compatibility (PS) -16447 + (NN) -9171 + (LL) -308
1D Compatibility (HY) -14400 + (ID) 4600
Total energy: -161505.0 ( -126.08 by residue)
QMean score : 0.596
(partial model without unconserved sides chains):
PDB file :
Tito_3F0G.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3F0G-query.scw
PDB file :
Tito_Scwrl_3F0G.pdb
: