Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMFFRMLKEDIDTVFDQDPAARSYFEVILTYSGLHAIWAHRIAHALYKRKFYFLA-RLISQVSRFFTGIEIHPGATIGRRFFIDHGMGVVIGETCEIGNNVTVFQGVTLGGTGKEKGKRHPTIKDDALIATGAKVLGSITVGEGSKIGAGSVVLHDVPDFSTVVGIPGRVVVQNGKKVRRDLNHQDLPDPVADRFKSLEQQILELKAELEDRKERINQK
3GVD Chain:E ((87-247))--------DILAVRLRDPAVDKYSTPLLYLKGFHALQAYRIGHWLWAQDRKALAIYLQNQVSVAF-GVDIHPAATIGCGIMLDHATGIVIGETAVVENDVSILQSVTLGGTGKTSGDRHPKIREGVMIGAGAKILGNIEVGRGAKIGAGSVVLQSVPAHTTAAGVPARIV------------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 3GVD.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -139426 for 1319 contacts (-105.7/contact) +
2D Compatibility (PS) -17214 + (NN) -5132 + (LL) 4584
1D Compatibility (HY) -12400 + (ID) 4050
Total energy: -173638.0 ( -131.64 by residue)
QMean score : 0.561

(partial model without unconserved sides chains):
PDB file : Tito_3GVD.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-3GVD-query.scw
PDB file : Tito_Scwrl_3GVD.pdb: