Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
Query sequence
-MDILLVDGYNMIGAWPQLKDLKANSFEEARDVLIQK--------MAEYQSYTGNRVIVVFDAHLVKGLEKKQTNHRVEVIFTKENET-ADERIEKLAQALNNIATQIHVATSDYTEQWAIFGQGALRKSARELLREVETIERRIERRVRKITSEKPAGKIALSEEVLKTFEKWRRGDLD---
3V32 Chain:A ((134-296))
DLRPVVIDGSNVAMSHGNKEVFSCRGILLAVNWFLERGHTDITVFVPSWRKEQPRPDVPITDQHILRELEKKKI-----LVFTPSRRCYDDRFIVKLAYESDG----IVVSNDTY----------------RDLQGERQEWKRFIEERLLMYSFVN--DKFMPPDDPLGRHGPSLDNFLRKKP
General information:
TITO was launched using:
RESULT:
Template:
3V32.pdb
Alignment :
align.pir
Tito was launched with SMD and SCWRL
Tito text output
3D Compatibility (PKB) -26849 for 1066 contacts (-25.2/contact) +
2D Compatibility (PS) -15550 + (NN) -6281 + (LL) 2172
1D Compatibility (HY) -6800 + (ID) 1500
Total energy: -54808.0 ( -51.41 by residue)
QMean score : 0.332
(partial model without unconserved sides chains):
PDB file :
Tito_3V32.pdb
:
(Unconserved sides chains are recalculated) :
Sequence:
align-3V32-query.scw
PDB file :
Tito_Scwrl_3V32.pdb
: