Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MSYDRVKDFDLPELAVHLQPHGAVMIDRKSMFYFRLSGRGAQLAFLLSKNKNLHKTARIWEIMKKEEMSADQLKEELSAHPFTEAWTEGLLDQPLHVSGSLDSYLPISCTLQLTNACNLSCSFCY---ASSGKPYPEELSSEQWILVMQKLAAHGVADITLT--GGEAKL--IKGFKELVVVASS-----LFTNVNVFSNGLNWRDEEVELLSHLGNVSVQISIDGMDNTHDQLRGRKGG---FKESMNTIKKLSEANIPVIVAMTINESNADEVSDVVEQCANAGAFIFRAGKTLSVGRATEGFKALDI---DFEEMVQIQLREARHKWGD---------RLNIIDWEHEESSFTTDFCTPGYLAWYIRADGYVTPCQL---EDLPLGHILEDSMADIGSPARLLQLKC-------EAKNCKCIGKIELSEPDLPFQKE--------VKAGIQE------------------------------- |
| 4K36 Chain:A ((2-392)) | -----------PPLSLLIKPASSG--------------------------------------------------------------------------------------------CNLKCTYCFYHSLSDNVKSYGIMRDEVLESMVKRVLNEANGHCSFAFQGGEPTLAGLEFFEKLMELQRKHNYKNLKIYNSLQTNGTLIDESWAKFLSE-NKFLVGLSMDGPKEIHNLNRKDCCGLDTFSKVERAAELFKKYKVEFNILCVVTSNTARHVNKVYKYFKEKDFKFLQFINCLDPLYEEKGKYNYSLKPKDYTKFLKNLFDFWYEDFLNGNRVSIRYFDGLLETILLGKSSSCGMNGTCTC-QFVVESDGSVYPCDFYVLDKWRLGNIQDMTMKELFETNKNHEFIKLSFKVHEECKKCKWFRLCKGGCRRCRDSKEDSALELNYYCQSYKEFFEYAFPRLINVANNIVDKLAAALEHHHHHH |
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General information:
TITO was launched using:
| RESULT:
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Template: 4K36.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -84929 for 2323 contacts (-36.6/contact) +
2D Compatibility (PS) -33336 + (NN) -23081 + (LL) 7996
1D Compatibility (HY) -16800 + (ID) 2700
Total energy: -152850.0 ( -65.80 by residue)
QMean score : 0.387
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