Modeling by threading (Tito software) Unconserved sides chains calculation (Scwrl software) Evaluation (QMean software)
Input alignment information:
Query sequence | MKTLWKVLKIVFVSLAALVLLVSVSVFIYHHFQLNKEAALLKGKGTVVDVDGKKMNVYQEGSGKDTFVFMSGSGIAAPAYEMKGLYSKFSKEN-KIAVVDRAGYGYSEVSHDD-RDIDTVLEQTRKALMKSGNKPPYILMPHSISGIEAMYWAQKYPKEIKAIIAMDIGLPQQYVT----YKLSGVDRLKVRGFHLLTSIGFHRFIPSAVYNPEVIRQSFLTDEEKEIYKAINFKQFFNADMEHELLQSYQNGSKSVNLPAPKETPVLILDAVSDQNRHSKYAIQNRKDYEAFAAQFNTADIKELRGT-HSIYLYQPDQIYKLSMEFMRKVR |
1QJ4 Chain:A ((2-257)) | --------------------------------------------------------------AFAHFVLIHTICHGAWIW--HKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLEALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPDTEHCPSYVVDKLMEVFPDWKDTTYFTYTKDGKEITGLKLGFTLLRENLYTLCGPEEYELAKMLTRKGSLFQNILAKR-----PFFTKEGYGSIKKIYVWTDQDE-------IFLPEFQLWQIENYKPDKVYKVEGGDHKLQLTKTKEIAEILQEVADTYN |
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General information:
TITO was launched using:
| RESULT:
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Template: 1QJ4.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -90624 for 2130 contacts (-42.5/contact) +
2D Compatibility (PS) -26318 + (NN) -8461 + (LL) 6452
1D Compatibility (HY) -6000 + (ID) 1800
Total energy: -126751.0 ( -59.51 by residue)
QMean score : 0.379
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