Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)
Input alignment information:
| Query sequence | MLLFTAVISVPMLLLAVSVLMSVIYDSMFKPMNHGMPFHRSFAYPAMIVVFLISLLLLAFLFSKSIHSLLHKINLLNQTIRHLASDQRVPDKIEVKRADEIGELIKSVNLLIERTTYRELELRQQEEIKKELLQKLRHDINTPLTALRLQLFYLEDQCH------G---QAVFESLYQQIEYISELTNEFNLYSAETLESSYIVNEEVRLNELLETAVKKWDYLYSMSGIELHYKPADQDVIWMSNTLWMERLFDNIFQNTLRHSKAKK---MEVTIE-----HGDVFIRDDGIGFDRN-------------ESSEGLGLKIIEDTCRLLAITYELHTNDN-GTGFLFSKE |
| 4GCZ Chain:A ((152-370)) | --------------------------------------------------------------------------------------------------------------------------------MGEMASALAHELNQPLAAISNYMKGSRRLLAGSSDPNTPKVESALDRAAEQALRAGQIIRRLRDFVARGE----SEKRVESLSKLIEEAGALGLAGAREQNVQLRFSLDPGADLVLADRVQIQQVLVNLFRNALEAMAQSQRRELVVTNTPAADDMIEVEVSDTGSGFQDDVIPNLFQTFFTTKDTGMGVGLSISRSIIEAHGGRMWAESNASGGATFRFTLP |
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General information:
TITO was launched using:
| RESULT:
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Template: 4GCZ.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
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3D Compatibility (PKB) -70635 for 1261 contacts (-56.0/contact) +
2D Compatibility (PS) -20212 + (NN) -8813 + (LL) 12892
1D Compatibility (HY) -2400 + (ID) 1650
Total energy: -90818.0 ( -72.02 by residue)
QMean score : 0.405
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