Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMTHVKALAIKGIMTIIVLYLVLGLGFGFTFGDTLLMTIVLGVISYLLGDLYVLPKWNNMIATLADFGLAFLVIWLMGMPLSMGMTGGEVALAALFGAIVMAIGEYCFHFYMMSKEIGKKHYLETRTDS
2J8S Chain:A ((341-404))---VKTLVEAIILVFLVMYLFLQ-----NFRATLIPTIAVPVV--LLGTF----------AVLAAFGFSINTLTMFGMVLAIGL--------------------------------------------


General information:
TITO was launched using:
RESULT:

Template: 2J8S.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 118 -33439 -283.38 -522.48
target 2D structure prediction score : 0.72
Monomeric hydrophicity matching model chain A : 0.62

3D Compatibility (PKB) : -283.38
2D Compatibility (Sec. Struct. Predict.) : 0.72
1D Compatibility (Hydrophobicity) : 0.62
QMean score : 0.073

(partial model without unconserved sides chains):
PDB file : Tito_2J8S.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-2J8S-query.scw
PDB file : Tito_Scwrl_2J8S.pdb: