Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequenceMGITKEEVNSYYQKAGIVLTDEEVDQIQLMDYGLGKERKVGLQLFVYVNTDRYCSKELVLFPGQTCPEHRHPPVDGQEGKQETFRCRYGKVYLYVEGEKTPLPKVLPPQEDREHYTVWHEIELEP--GGQYTIPPNTKHWFQAGEEGAVVTEMSSTSTDKHDIFTDPRI
1UPI Chain:A ((50-137))--------------------------------------------------------CSVSSAGVLRGLHFAQL---PPSQAKYVTCVSGSVFDVVVDIRE----------GSPTFGRWDSVLLDDQDRRTIYVSEGLAHGFLALQDNSTVMYLCSAE------------


General information:
TITO was launched using:
RESULT:

Template: 1UPI.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain A - contact count / total energy / energy per contact / energy per residue : 425 -25649 -60.35 -298.24
target 2D structure prediction score : 0.65
Monomeric hydrophicity matching model chain A : 0.59

3D Compatibility (PKB) : -60.35
2D Compatibility (Sec. Struct. Predict.) : 0.65
1D Compatibility (Hydrophobicity) : 0.59
QMean score : 0.477

(partial model without unconserved sides chains):
PDB file : Tito_1UPI.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-1UPI-query.scw
PDB file : Tito_Scwrl_1UPI.pdb: