Modeling by threading (Tito software)
Unconserved sides chains calculation (Scwrl software)
Evaluation (QMean software)



Input alignment information:
Query sequence---MIISYKCPNCGSDMAFDSETGSLSCSSCGRQDNIESLP-----KENIAARFSDDEAKEYQCKNCGAVLITEAETTATTCSFCGGAAILADRLSGHLAPAKVIPFTI-SKQEAEQAFRKWCKKGLLTPRGFM----SADRIKSITGMYIPFW-----MFDLNSEVQVRANCTRVHQYEEGDYICTETEHFEAF-RDINLDYLKIPVDASEKMKDELMDKLEPYSYEELKDFQTAYLAGYIAEKYNYTD--EELFPRAKEKISSYIDSYIHSTFSGYTSVNVRDKHIHTK----------NVNSFYVLLPVWMVSYDYERAEHIFAMNGQTGKVVGKPPISRGKVAAWFSGIA----GGTFLALKLVSLMMGGGF-------------------------------------------
4XGC Chain:E ((1-458))MEAICSSLEPLFPCREAAIETLGELIGDSSETYPSAIYLFGHSGTGKTALTRAFLKECGKRQN--------VRTAHLNAIECY---TTKIMLEILLDSLAPDQGDALKVDNMLDFVEQLRRQAATRV-EDQGFLIAVDNAERLRDMDANVLPVLLRLQELTNLNLCVILLSQLPFEKFYNKTGLSEIVCLHLAQYNKAETQRILGSDFQQVRNQLLEQKKRLEICQEAVTEDFYNNYLNLFLSVFYKACRDVPELQLTARKCLSTYLEPVLDGTSRLWRHIAGPLRSALTQIYMRIESLELPYYAKFLLIAAFLASHNAAKQDKRLF-----STTLGPKSFSIDRLLAIFYAILEEKVGLTCNLLSQISTLVHLNLLSFVSGEQNIMEGSARLQCTIGLEFVLQIGKVVGFNVRQYLCD


General information:
TITO was launched using:
RESULT:

Template: 4XGC.pdb
Alignment : align.pir
Tito was launched with SMD and SCWRL
Tito text output
Monomeric PKB - chain E - contact count / total energy / energy per contact / energy per residue : 1163 -147047 -126.44 -453.85
target 2D structure prediction score : 0.49
Monomeric hydrophicity matching model chain E : 0.65

3D Compatibility (PKB) : -126.44
2D Compatibility (Sec. Struct. Predict.) : 0.49
1D Compatibility (Hydrophobicity) : 0.65
QMean score : 0.246

(partial model without unconserved sides chains):
PDB file : Tito_4XGC.pdb:





(Unconserved sides chains are recalculated) :
Sequence: align-4XGC-query.scw
PDB file : Tito_Scwrl_4XGC.pdb: